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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs5998366 chr22:32665525 C/T ARSA chr22:51061182-51066601:- 0.77 7.97 1.14E-14 Box Plot
THCA rs5998366 chr22:32665525 C/T ARVCF chr22:19957419-20004331:- 0.66 7.2 2.29E-12 Box Plot
THCA rs5998366 chr22:32665525 C/T ASCC2 chr22:30184597-30234293:- 0.68 7.95 1.32E-14 Box Plot
THCA rs5998366 chr22:32665525 C/T ATF4 chr22:39915700-39918690:+ 0.57 6.27 7.92E-10 Box Plot
THCA rs5998366 chr22:32665525 C/T ATP6V1E1 chr22:18074902-18111584:- 0.4 6.09 2.32E-9 Box Plot
THCA rs5998366 chr22:32665525 C/T ATXN10 chr22:46067678-46241187:+ 0.81 8.95 7.8E-18 Box Plot
THCA rs5998366 chr22:32665525 C/T BCR chr22:23521891-23660224:+ 0.53 6.06 2.78E-9 Box Plot
THCA rs5998366 chr22:32665525 C/T BRD1 chr22:50166931-50221160:- 0.6 6.82 2.79E-11 Box Plot
THCA rs5998366 chr22:32665525 C/T C22orf13 chr22:24936406-24951903:- 0.65 7.45 4.37E-13 Box Plot
THCA rs5998366 chr22:32665525 C/T C22orf23 chr22:38339057-38349676:- 0.73 8.42 4.36E-16 Box Plot
THCA rs5998366 chr22:32665525 C/T C22orf26 chr22:46445358-46450024:- 0.7 6.05 2.95E-9 Box Plot
THCA rs5998366 chr22:32665525 C/T C22orf32 chr22:42475699-42480287:+ 0.61 7.74 6.16E-14 Box Plot
THCA rs5998366 chr22:32665525 C/T C22orf39 chr22:19338891-19435755:- 0.67 7.5 3.16E-13 Box Plot
THCA rs5998366 chr22:32665525 C/T C22orf40 chr22:46639911-46646193:- 0.61 8.12 3.9E-15 Box Plot
THCA rs5998366 chr22:32665525 C/T C22orf46 chr22:42084943-42094140:+ 0.83 7.28 1.36E-12 Box Plot